Description
The Genome Analysis Toolkit or GATK is a software package developed at the Broad Institute to analyze high-throughput sequencing data. The toolkit offers a wide variety of tools, with a primary focus on variant discovery and genotyping as well as strong emphasis on data quality assurance. Its robust architecture, powerful processing engine and high-performance computing features make it capable of taking on projects of any size.
Home page
https://www.broadinstitute.org/gatk/
Documentation
https://www.broadinstitute.org/gatk/
License
https://github.com/broadinstitute/gatk/blob/master/LICENSE.TXT
Usage
module avail GATK
to see which versions of GATK are available. Use
module load GATK/version
to get access to GATK.
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